Transcript: ENST00000563728.1 MYLPF-004

Description

myosin light chain, phosphorylatable, fast skeletal muscle [Source:HGNC Symbol;Acc:29824]

Gene Synonyms

HUMMLC2B, MRLC2, MYL11

Location

Chromosome 16: 30,388,884-30,389,312 forward strand.

About this transcript

This transcript has 2 exons, is associated with 328 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000180209.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322861.7	MYLPF-001	682	169aa	ENSP00000325239.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10677	H3BML9 H3BN54 Q96A32	NM_013292.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568749.1	MYLPF-005	623	135aa	ENSP00000454694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BML9 H3BN54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566955.1	MYLPF-003	604	199aa	ENSP00000455356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPK4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000563718.1	MYLPF-002	602	118aa	ENSP00000454444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BML9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563728.1	MYLPF-004	336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 336 bps,

Version

ENST00000563728.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434117 (version 1)

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Transcript: ENST00000563728.1 MYLPF-004

Summary