Transcript: ENST00000476588.1 NSUN3-002

Description

NOP2/Sun domain family, member 3 [Source:HGNC Symbol;Acc:26208]

Gene Synonyms

FLJ22609, MST077

Location

Chromosome 3: 93,781,834-93,804,226 forward strand.

About this transcript

This transcript has 3 exons, is associated with 9052 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000178694.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314622.4	NSUN3-001	3289	340aa	ENSP00000318986.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2927	Q9H649	NM_022072.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483378.1	NSUN3-007	582	77aa	ENSP00000419297.1	Nonsense mediated decay		F8WF52	-	-
ENST00000485793.1	NSUN3-006	816	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477077.1	NSUN3-003	751	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468555.1	NSUN3-005	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494128.1	NSUN3-008	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461625.1	NSUN3-004	378	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476588.1	NSUN3-002	1535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,535 bps,

Version

ENST00000476588.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352935 (version 1)

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Transcript: ENST00000476588.1 NSUN3-002

Summary