Transcript: ENST00000519564.1 ZNF454-002

Description

zinc finger protein 454 [Source:HGNC Symbol;Acc:21200]

Gene Synonyms

FLJ37444

Location

About this transcript

This transcript has 5 exons, is annotated with 72 domains and features, is associated with 11025 variant alleles and maps to 249 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320129.3	ZNF454-001	2332	522aa	ENSP00000326249.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4441	Q8N9F8	NM_182594.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519564.1	ZNF454-002	2142	522aa	ENSP00000430354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4441	Q8N9F8	NM_001178089.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522827.1	ZNF454-003	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,142 bps, Translation length: 522 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N9F8

CCDS

This transcript is a member of the Human CCDS set: CCDS4441

Version

ENST00000519564.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374386 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.