Transcript: ENST00000518476.1 CNBD1-001

Description

cyclic nucleotide binding domain containing 1 [Source:HGNC Symbol;Acc:26663]

Gene Synonyms

FLJ35802

Location

Chromosome 8: 87,878,673-88,395,087 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 264229 variant alleles and maps to 399 oligo probes.

Gene

This transcript is a product of gene ENSG00000176571.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000518476.1	CNBD1-001	1594	436aa	ENSP00000430073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55259	Q8NA66	NM_173538.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523299.1	CNBD1-004	659	207aa	ENSP00000430986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521593.1	CNBD1-005	651	161aa	ENSP00000427742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522427.1	CNBD1-003	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517748.1	CNBD1-002	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522105.1	CNBD1-006	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,594 bps, Translation length: 436 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NA66

CCDS

This transcript is a member of the Human CCDS set: CCDS55259

Version

ENST00000518476.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375113 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000518476.1 CNBD1-001

Summary