Transcript: ENST00000553522.1 GPX2-002

Description

glutathione peroxidase 2 (gastrointestinal) [Source:HGNC Symbol;Acc:4554]

Gene Synonyms

GI-GPx, GPRP, GPRP-2, GPx-2, GPx-GI, GSHPX-GI, GSHPx-2

Location

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 1652 variant alleles and maps to 294 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389614.5	GPX2-001	990	190aa	ENSP00000374265.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41964	P18283	NM_002083.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557049.1	GPX2-004	476	134aa	ENSP00000451721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJK8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553522.1	GPX2-002	1134	78aa	ENSP00000450991.1	Nonsense mediated decay		-	-	-
ENST00000557323.1	GPX2-003	778	78aa	ENSP00000451844.1	Nonsense mediated decay		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,134 bps, Translation length: 78 residues

Version

ENST00000553522.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000414707 (version 1)