Transcript: ENST00000444074.2 SUGCT-008

Description

succinylCoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:16001]

Gene Synonyms

C7orf10, DERP13, FLJ11808, ORF19

Location

Chromosome 7: 40,174,600-40,234,574 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 25534 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000175600.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309930.5	SUGCT-201	1719	471aa	ENSP00000312054.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55104	Q75MI5 Q75MS9 Q75MU8 Q9HAC7 Q9Y6U8	NM_024728.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335693.4	SUGCT-001	1645	445aa	ENSP00000338475.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55105	B4DJF0 Q75MI5 Q75MS9 Q9HAC7 Q9Y6U8	NM_001193313.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416370.1	SUGCT-002	1593	421aa	ENSP00000393032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q75MI5 Q9Y6U8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000401647.2	SUGCT-003	1369	397aa	ENSP00000385222.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55106	Q75MS9 Q9HAC7 Q9Y6U8	NM_001193312.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540834.1	SUGCT-202	1217	202aa	ENSP00000445521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z568	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413931.1	SUGCT-004	539	180aa	ENSP00000395000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000444074.2	SUGCT-008	367	49aa	ENSP00000401187.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000464028.1	SUGCT-005	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488110.1	SUGCT-007	500	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460466.1	SUGCT-006	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 367 bps, Translation length: 49 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000444074.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338395 (version 2)

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Recent locations

Transcript: ENST00000444074.2 SUGCT-008

Summary