Transcript: ENST00000519773.1 LPL-007

Description

lipoprotein lipase [Source:HGNC Symbol;Acc:6677]

Gene Synonyms

HDLCQ11, LIPD

Location

Chromosome 8: 19,796,767-19,805,814 forward strand.

About this transcript

This transcript has 3 exons, is associated with 4670 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSG00000175445.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311322.8	LPL-001	3846	475aa	ENSP00000309757.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6012	E5RHN7 E5RJI0 E7EW14 P06858 Q4JIZ7 Q71UV2	NM_000237.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524029.1	LPL-003	629	129aa	ENSP00000428237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHN7 E5RJI0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520959.1	LPL-006	560	115aa	ENSP00000428496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EW14 Q4JIZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522701.1	LPL-004	559	105aa	ENSP00000428557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHN7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519773.1	LPL-007	554	39aa	ENSP00000431028.1	Nonsense mediated decay		E5RJZ4	-	-
ENST00000521994.1	LPL-005	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523696.1	LPL-008	463	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 554 bps, Translation length: 39 residues

Version

ENST00000519773.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375114 (version 1)

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Transcript: ENST00000519773.1 LPL-007

Summary