Transcript: ENST00000509190.1 PCSK1-005

Description

proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:8743]

Gene Synonyms

BMIQ12, NEC1, PC1, PC3, SPC3

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 5058 variant alleles and maps to 118 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311106.3	PCSK1-001	5086	753aa	ENSP00000308024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4081	D6RJA3 P29120	NM_001177876.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508626.1	PCSK1-002	2234	706aa	ENSP00000421600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54881	P29120	NM_001177875.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509190.1	PCSK1-005	565	157aa	ENSP00000427294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJA3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513085.1	PCSK1-004	1481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 565 bps, Translation length: 157 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000509190.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000370541 (version 1)