Transcript: ENST00000529244.1 CATSPER1-002

Description

cation channel, sperm associated 1 [Source:HGNC Symbol;Acc:17116]

Gene Synonyms

CATSPER, SPGF7

Location

About this transcript

This transcript has 6 exons, is associated with 2314 variant alleles and maps to 165 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312106.5	CATSPER1-001	2619	780aa	ENSP00000309052.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8127	Q8NEC5	NM_053054.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529244.1	CATSPER1-002	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 720 bps,

Version

ENST00000529244.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391056 (version 1)