Transcript: ENST00000507126.1 SRP72-004

Description

signal recognition particle 72kDa [Source:HGNC Symbol;Acc:11303]

Gene Synonyms

BMFF, HEL103

Location

Chromosome 4: 57,366,678-57,369,839 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1428 variant alleles and maps to 403 oligo probes.

Gene

This transcript is a product of gene ENSG00000174780.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342756.5	SRP72-001	3983	671aa	ENSP00000342181.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3506	O76094 Q86X80	NM_006947.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510663.1	SRP72-005	2473	610aa	ENSP00000424576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58898	O76094	NM_001267722.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505314.1	SRP72-002	1071	357aa	ENSP00000425190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000504757.1	SRP72-008	740	220aa	ENSP00000473576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNC1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507126.1	SRP72-004	2174	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,174 bps,

Version

ENST00000507126.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362151 (version 1)

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Transcript: ENST00000507126.1 SRP72-004

Summary