Transcript: ENST00000342756.5 SRP72-001

Description

signal recognition particle 72kDa [Source:HGNC Symbol;Acc:11303]

Gene Synonyms

BMFF, HEL103

Location

Chromosome 4: 57,333,081-57,369,273 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 33 domains and features, is associated with 16542 variant alleles and maps to 975 oligo probes.

Gene

This transcript is a product of gene ENSG00000174780.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342756.5	SRP72-001	3983	671aa	ENSP00000342181.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3506	O76094 Q86X80	NM_006947.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510663.1	SRP72-005	2473	610aa	ENSP00000424576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58898	O76094	NM_001267722.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505314.1	SRP72-002	1071	357aa	ENSP00000425190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000504757.1	SRP72-008	740	220aa	ENSP00000473576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNC1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507126.1	SRP72-004	2174	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,983 bps, Translation length: 671 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O76094

CCDS

This transcript is a member of the Human CCDS set: CCDS3506

Version

ENST00000342756.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250782 (version 7)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000342756.5 SRP72-001

Summary