Transcript: ENST00000354811.5 RPL15-007

Description

ribosomal protein L15 [Source:HGNC Symbol;Acc:10306]

Gene Synonyms

DBA12, EC45, L15, RPL10, RPLY10, RPYL10

Location

Chromosome 3: 23,959,196-23,961,042 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 1062 variant alleles and maps to 344 oligo probes.

Gene

This transcript is a product of gene ENSG00000174748.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307839.5	RPL15-001	2730	204aa	ENSP00000309334.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2640	E7EQV9 E7EX53 P61313 Q76N55	NM_002948.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456530.2	RPL15-201	2500	145aa	ENSP00000398788.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58818	P61313 Q76N55	NM_001253384.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413699.1	RPL15-002	2053	204aa	ENSP00000416692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2640	E7EQV9 E7EX53 P61313 Q76N55	NM_001253383.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435882.1	RPL15-005	1063	204aa	ENSP00000390193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2640	E7EQV9 E7EX53 P61313 Q76N55	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415719.1	RPL15-013	830	204aa	ENSP00000388529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2640	E7EQV9 E7EX53 P61313 Q76N55	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354811.5	RPL15-007	820	204aa	ENSP00000346867.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2640	E7EQV9 E7EX53 P61313 Q76N55	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434031.2	RPL15-014	650	174aa	ENSP00000405590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQV9 E7EX53 Q76N55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422218.1	RPL15-009	588	133aa	ENSP00000387925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EX53 Q76N55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412097.1	RPL15-011	562	175aa	ENSP00000411176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENU7 Q76N55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436146.1	RPL15-008	1990	59aa	ENSP00000408243.1	Nonsense mediated decay		E7ERA2 Q76N55	-	-
ENST00000490223.1	RPL15-004	1785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465786.1	RPL15-006	1729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 820 bps, Translation length: 204 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61313

CCDS

This transcript is a member of the Human CCDS set: CCDS2640

Version

ENST00000354811.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340870 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000354811.5 RPL15-007

Summary