Transcript: ENST00000542268.1 MYO1H-003

Description

myosin IH [Source:HGNC Symbol;Acc:13879]

Gene Synonyms

FLJ37587

Location

Chromosome 12: 109,877,342-109,885,260 forward strand.

About this transcript

This transcript has 9 exons, is associated with 4527 variant alleles and maps to 318 oligo probes.

Gene

This transcript is a product of gene ENSG00000174527.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310903.5	MYO1H-001	4364	1022aa	ENSP00000439182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53826	F5H3C6 S4R387	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431443.2	MYO1H-201	4288	1032aa	ENSP00000444076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N1T3 S4R387	NM_001101421.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543960.1	MYO1H-006	535	126aa	ENSP00000474025.1	Nonsense mediated decay		S4R387	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000542883.1	MYO1H-004	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542268.1	MYO1H-003	1190	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000457826.2	MYO1H-005	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,190 bps,

Version

ENST00000542268.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403094 (version 2)

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Transcript: ENST00000542268.1 MYO1H-003

Summary