Transcript: ENST00000340781.4 SLC26A9-003

Description

solute carrier family 26 (anion exchanger), member 9 [Source:HGNC Symbol;Acc:14469]

Location

Chromosome 1: 205,882,176-205,904,950 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 23 domains and features, is associated with 10967 variant alleles and maps to 600 oligo probes.

Gene

This transcript is a product of gene ENSG00000174502.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367134.2	SLC26A9-201	4616	887aa	ENSP00000356102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30989	B1AVM8	NM_134325.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367135.3	SLC26A9-001	4799	791aa	ENSP00000356103.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30990	Q7LBE3	NM_052934.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340781.4	SLC26A9-003	4510	887aa	ENSP00000341682.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30989	B1AVM8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491127.1	SLC26A9-002	4063	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469392.1	SLC26A9-005	899	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461505.1	SLC26A9-006	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 4,510 bps, Translation length: 887 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS30989

Version

ENST00000340781.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000087940 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000340781.4 SLC26A9-003

Summary