Transcript: ENST00000308979.2 TLR1-201

Description

toll-like receptor 1 [Source:HGNC Symbol;Acc:11847]

Gene Synonyms

CD281, KIAA0012, TIL, TIL. LPRS5, rsc786

Location

Chromosome 4: 38,797,880-38,806,412 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 42 domains and features, is associated with 3966 variant alleles and maps to 405 oligo probes.

Gene

This transcript is a product of gene ENSG00000174125.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308979.2	TLR1-201	2847	786aa	ENSP00000354932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33973	D6RA99 D6RAP2 D6RCE8 D6RF68 Q15399 Q32MK4	NM_003263.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502213.2	TLR1-001	2779	786aa	ENSP00000421259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33973	D6RA99 D6RAP2 D6RCE8 D6RF68 Q15399 Q32MK4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505940.1	TLR1-005	648	161aa	ENSP00000421856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA99 D6RAP2 D6RCE8 D6RF68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508364.1	TLR1-007	605	23aa	ENSP00000424894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515861.1	TLR1-006	578	90aa	ENSP00000423017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA99 D6RCE8 D6RF68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506146.1	TLR1-004	555	48aa	ENSP00000423725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCE8 D6RF68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510552.1	TLR1-010	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505744.1	TLR1-003	619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509754.1	TLR1-009	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508535.1	TLR1-008	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 2,847 bps, Translation length: 786 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15399

CCDS

This transcript is a member of the Human CCDS set: CCDS33973

Version

ENST00000308979.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000308979.2 TLR1-201

Summary