Transcript: ENST00000530775.1 SPTBN2-009

Description

spectrin, beta, non-erythrocytic 2 [Source:HGNC Symbol;Acc:11276]

Gene Synonyms

GTRAP41, KIAA0302, SCA5, SCAR14

Location

Chromosome 11: 66,454,264-66,454,995 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 373 variant alleles and maps to 109 oligo probes.

Gene

This transcript is a product of gene ENSG00000173898.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000533211.1	SPTBN2-001	8128	2390aa	ENSP00000432568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8150	C1KC08 E9PJZ2 O15020	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529997.1	SPTBN2-003	8085	2365aa	ENSP00000433593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C1KC08 E9PJZ2 O15020	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309996.2	SPTBN2-201	7866	2390aa	ENSP00000311489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8150	C1KC08 E9PJZ2 O15020	NM_006946.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527010.1	SPTBN2-004	859	117aa	ENSP00000433631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C1KC08 E9PJZ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528051.1	SPTBN2-008	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532902.1	SPTBN2-006	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532650.1	SPTBN2-007	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530775.1	SPTBN2-009	473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530665.1	SPTBN2-010	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 473 bps,

Version

ENST00000530775.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393896 (version 1)

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Transcript: ENST00000530775.1 SPTBN2-009

Summary