Description
protein tyrosine phosphatase, receptor type, M [Source:HGNC Symbol;Acc:9675]
Gene Synonyms
PTPRL1, R-PTP-MU, RPTPM, RPTPU, hR-PTPu
Location
Chromosome 18: 8,121,850-8,406,664 forward strand.
About this transcript
This transcript has 17 exons, is associated with 121696 variant alleles and maps to 662 oligo probes.
Gene
This transcript is a product of gene ENSG00000173482.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000580170.1 | PTPRM-012 | 5941 | 1465aa | ENSP00000463325.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58613 | P28827 Q49AC9 | NM_001105244.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000332175.8 | PTPRM-001 | 6095 | 1452aa | ENSP00000331418.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11840 | E7EPS8 P28827 Q49AC9 | NM_002845.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000400053.4 | PTPRM-003 | 5292 | 1390aa | ENSP00000382927.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EPS8 Q49AC9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000444013.1 | PTPRM-202 | 4414 | 1239aa | ENSP00000387608.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EVX9 J3QLI4 Q49AC9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000400060.4 | PTPRM-201 | 4401 | 1466aa | ENSP00000382933.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WA38 Q49AC9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000583289.1 | PTPRM-008 | 792 | 264aa | ENSP00000462176.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000583153.1 | PTPRM-016 | 713 | 238aa | ENSP00000462809.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000577468.1 | PTPRM-010 | 701 | 207aa | ENSP00000464128.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRB4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000578916.1 | PTPRM-004 | 604 | 173aa | ENSP00000463558.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLI4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000578571.1 | PTPRM-006 | 1106 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000580949.1 | PTPRM-017 | 687 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000580838.1 | PTPRM-015 | 676 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578600.1 | PTPRM-005 | 578 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578698.1 | PTPRM-007 | 486 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578093.1 | PTPRM-009 | 464 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000577827.1 | PTPRM-013 | 4640 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |