Transcript: ENST00000503915.1 COQ2-004

Description

coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:HGNC Symbol;Acc:25223]

Gene Synonyms

CL640, COQ10D1, FLJ26072, MSA1

Location

Chromosome 4: 84,184,977-84,200,211 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 6257 variant alleles and maps to 319 oligo probes.

Gene

This transcript is a product of gene ENSG00000173085.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311469.4	COQ2-001	1641	421aa	ENSP00000310873.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47090	Q96H96	NM_015697.7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439031.2	COQ2-201	1639	384aa	ENSP00000409275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96H96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000311461.7	COQ2-003	1464	328aa	ENSP00000311835.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E2QRG7 H0YAI0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503391.1	COQ2-002	1304	213aa	ENSP00000426242.1	Nonsense mediated decay		E7EPM7	-	-
ENST00000503915.1	COQ2-004	1301	225aa	ENSP00000427146.1	Nonsense mediated decay		H0YAI0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514935.1	COQ2-005	407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,301 bps, Translation length: 225 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000503915.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363977 (version 1)

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Transcript: ENST00000503915.1 COQ2-004

Summary