Transcript: ENST00000519150.1 NIPAL4-005

Description

NIPA-like domain containing 4 [Source:HGNC Symbol;Acc:28018]

Gene Synonyms

ARCI6, ICHN, ICHTHYIN, ICHYN, NIPA4

Location

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 4984 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311946.7	NIPAL4-001	3274	466aa	ENSP00000311687.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47328	Q0D2K0	NM_001099287.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435489.2	NIPAL4-002	1600	447aa	ENSP00000406456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54944	Q0D2K0	NM_001172292.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519150.1	NIPAL4-005	788	132aa	ENSP00000430810.1	Nonsense mediated decay		H0YC31	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521390.1	NIPAL4-003	1151	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519946.1	NIPAL4-006	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 788 bps, Translation length: 132 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000519150.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373793 (version 1)