Transcript: ENST00000529430.1 CLP1-004

Description

cleavage and polyadenylation factor I subunit 1 [Source:HGNC Symbol;Acc:16999]

Gene Synonyms

HEAB, hClp1

Location

Chromosome 11: 57,424,488-57,429,321 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 2327 variant alleles and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSG00000172409.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000533682.1	CLP1-001	2435	425aa	ENSP00000434995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7964	E9PJM4 E9PKV5 Q92989	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529430.1	CLP1-004	1778	436aa	ENSP00000433406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJM4 E9PKV5 E9PL17	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000302731.4	CLP1-003	1634	361aa	ENSP00000304704.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44600	E9PJM4 E9PKV5 Q92989	NM_006831.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525602.1	CLP1-002	1392	425aa	ENSP00000436066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7964	E9PJM4 E9PKV5 Q92989	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529773.1	CLP1-006	566	92aa	ENSP00000435287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKV5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533905.1	CLP1-005	553	132aa	ENSP00000431744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJM4 E9PKV5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,778 bps, Translation length: 436 residues

Version

ENST00000529430.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393461 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000529430.1 CLP1-004

Summary