Transcript: ENST00000430350.2 PRNP-003

Description

prion protein [Source:HGNC Symbol;Acc:9449]

Gene Synonyms

ASCR, AltPrP, CD230, CJD, GSS, KURU, PRIP, PRP, PrP, PrP27-30, PrP33-35C, PrPc, p27-30

Location

About this transcript

This transcript has 2 exons, is annotated with 24 domains and features, is associated with 5993 variant alleles and maps to 462 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379440.4	PRNP-002	2657	253aa	ENSP00000368752.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13080	A2A2V1 O75942 P04156 Q53YK7 Q6SES1 Q86XR1	NM_183079.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430350.2	PRNP-003	2539	253aa	ENSP00000399376.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13080	A2A2V1 O75942 P04156 Q53YK7 Q6SES1 Q86XR1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457586.1	PRNP-001	855	217aa	ENSP00000415284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2NI04	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424424.1	PRNP-004	806	249aa	ENSP00000411599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2V1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,539 bps, Translation length: 253 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P04156

CCDS

This transcript is a member of the Human CCDS set: CCDS13080

Version

ENST00000430350.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000077821 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.