Transcript: ENST00000425838.1 FGB-003

Description

fibrinogen beta chain [Source:HGNC Symbol;Acc:3662]

Gene Synonyms

HEL-S-78p

Location

Chromosome 4: 155,484,169-155,488,767 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 2013 variant alleles and maps to 219 oligo probes.

Gene

This transcript is a product of gene ENSG00000171564.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302068.4	FGB-001	1975	491aa	ENSP00000306099.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3786	B4E1D3 D3DP13 D6REL8 P02675	NM_005141.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509493.1	FGB-010	1164	272aa	ENSP00000426757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425838.1	FGB-003	565	45aa	ENSP00000398719.1	Nonsense mediated decay		F8W6P4	-	-
ENST00000502545.1	FGB-011	1320	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498375.2	FGB-002	970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473984.1	FGB-005	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497097.1	FGB-004	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 565 bps, Translation length: 45 residues

Version

ENST00000425838.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000317597 (version 3)

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Transcript: ENST00000425838.1 FGB-003

Summary