Transcript: ENST00000306388.6 TBCA-002

Description

tubulin folding cofactor A [Source:HGNC Symbol;Acc:11579]

Location

Chromosome 5: 76,987,066-77,072,111 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 34687 variant alleles and maps to 365 oligo probes.

Gene

This transcript is a product of gene ENSG00000171530.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380377.4	TBCA-001	683	108aa	ENSP00000369736.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4040	E5RIW3 O75347 Q6FGD7	NM_004607.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306388.6	TBCA-002	2301	129aa	ENSP00000306362.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT30	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518338.2	TBCA-004	551	131aa	ENSP00000429793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517679.1	TBCA-003	545	119aa	ENSP00000429083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIW3 E5RJD8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520361.1	TBCA-006	446	79aa	ENSP00000429288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522370.1	TBCA-005	435	84aa	ENSP00000429313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIW3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520039.1	TBCA-007	157	26aa	ENSP00000429046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJM1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517881.1	TBCA-009	359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518218.1	TBCA-008	717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,301 bps, Translation length: 129 residues

Version

ENST00000306388.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000369507 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000306388.6 TBCA-002

Summary