Transcript: ENST00000590425.1 KRT13-007

Description

keratin 13 [Source:HGNC Symbol;Acc:6415]

Gene Synonyms

CK13, K13, MGC161462, MGC3781

Location

Chromosome 17: 39,659,270-39,661,957 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 1486 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSG00000171401.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000246635.3	KRT13-001	1699	458aa	ENSP00000246635.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11396	K7EMD9 K7ERE3 P13646	NM_153490.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336861.3	KRT13-002	1673	420aa	ENSP00000336604.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11397	K7EMD9 K7ERE3 P13646	NM_002274.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587544.1	KRT13-005	1456	415aa	ENSP00000468221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMD9 K7ERE3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590425.1	KRT13-007	572	165aa	ENSP00000466465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMD9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587435.1	KRT13-008	549	162aa	ENSP00000467833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464634.2	KRT13-006	1219	63aa	ENSP00000466525.1	Nonsense mediated decay		K7EMJ2	-	-
ENST00000587118.1	KRT13-009	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475217.1	KRT13-004	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468313.1	KRT13-003	1835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 572 bps, Translation length: 165 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000590425.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448593 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000590425.1 KRT13-007

Summary