Transcript: ENST00000599305.1 CEACAM3-005

Description

carcinoembryonic antigen-related cell adhesion molecule 3 [Source:HGNC Symbol;Acc:1815]

Gene Synonyms

CD66D, CD66d, CEA, CGM1, W264, W282

Location

Chromosome 19: 42,300,534-42,301,968 forward strand.

About this transcript

This transcript has 2 exons, is associated with 735 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene ENSG00000170956.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357396.3	CEACAM3-001	1316	252aa	ENSP00000349971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12586	M0QXR5 P40198	NM_001815.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000221999.4	CEACAM3-201	1098	212aa	ENSP00000221999.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62685	G5E978 M0QXR5	NM_001277163.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344550.4	CEACAM3-002	1022	212aa	ENSP00000341725.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62685	G5E978 M0QXR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596544.1	CEACAM3-006	474	99aa	ENSP00000469333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXR5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415495.1	CEACAM3-003	1640	177aa	ENSP00000411641.1	Nonsense mediated decay		B7Z5B4 M0QXR5 P40198	-	-
ENST00000595255.1	CEACAM3-004	1455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599662.1	CEACAM3-007	850	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599305.1	CEACAM3-005	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 588 bps,

Version

ENST00000599305.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000462915 (version 1)

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Transcript: ENST00000599305.1 CEACAM3-005

Summary