Transcript: ENST00000566391.1 ARL6IP1-005

Description

ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697]

Gene Synonyms

AIP1, ARL6IP, ARMER, KIAA0069

Location

Chromosome 16: 18,809,493-18,812,894 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1559 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000170540.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304414.7	ARL6IP1-001	2407	203aa	ENSP00000306788.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10572	F5GXP4 Q15041	NM_015161.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546206.2	ARL6IP1-002	1107	174aa	ENSP00000440048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562819.1	ARL6IP1-008	578	88aa	ENSP00000457372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTX6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562234.2	ARL6IP1-006	391	101aa	ENSP00000455341.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPJ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563861.1	ARL6IP1-003	948	99aa	ENSP00000456596.1	Nonsense mediated decay		H3BS91	-	-
ENST00000566391.1	ARL6IP1-005	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569976.1	ARL6IP1-007	778	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567969.1	ARL6IP1-004	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 806 bps,

Version

ENST00000566391.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435788 (version 1)

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Transcript: ENST00000566391.1 ARL6IP1-005

Summary