Transcript: ENST00000536324.2 SP7-001

Description

Sp7 transcription factor [Source:HGNC Symbol;Acc:17321]

Gene Synonyms

OI11, OI12, OSX, osterix

Location

About this transcript

This transcript has 3 exons, is annotated with 23 domains and features, is associated with 4519 variant alleles and maps to 270 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000536324.2	SP7-001	3148	431aa	ENSP00000443827.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44897	F8VV67 Q8TDD2	NM_001173467.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303846.3	SP7-002	2971	431aa	ENSP00000302812.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44897	F8VV67 Q8TDD2	NM_152860.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537210.2	SP7-003	1472	413aa	ENSP00000441367.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VV67 Q8TDD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547755.1	SP7-005	1042	269aa	ENSP00000449355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VV67	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,148 bps, Translation length: 431 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TDD2

CCDS

This transcript is a member of the Human CCDS set: CCDS44897

Version

ENST00000536324.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000406917 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.