Transcript: ENST00000303575.4 TMED10-001

Description

transmembrane emp24-like trafficking protein 10 (yeast) [Source:HGNC Symbol;Acc:16998]

Gene Synonyms

P24(DELTA), S31I125, S31III125, TMP21, Tmp-21-I, p23

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 18991 variant alleles and maps to 488 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303575.4	TMED10-001	4127	219aa	ENSP00000303145.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9840	B4DZH3 P49755	NM_006827.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555873.1	TMED10-003	1161	153aa	ENSP00000450726.1	Nonsense mediated decay		G3V2K7	-	-
ENST00000557670.1	TMED10-004	917	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556969.1	TMED10-005	1314	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555036.1	TMED10-006	888	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555085.1	TMED10-007	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,127 bps, Translation length: 219 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49755

CCDS

This transcript is a member of the Human CCDS set: CCDS9840

Version

ENST00000303575.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000415034 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.