Transcript: ENST00000371842.2 BRD3-004

Description

bromodomain containing 3 [Source:HGNC Symbol;Acc:1104]

Gene Synonyms

KIAA0043, ORFX, RING3L

Location

Chromosome 9: 136,917,555-136,921,134 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 1888 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSG00000169925.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303407.7	BRD3-001	5652	726aa	ENSP00000305918.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6980	A9J571 A9J575 B4DS09 Q15059	NM_007371.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371834.2	BRD3-002	2529	556aa	ENSP00000360900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J571 A9J575 Q15059	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357885.2	BRD3-201	1810	556aa	ENSP00000350557.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J571 A9J575 Q15059	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433041.1	BRD3-005	599	20aa	ENSP00000406749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J575	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000371842.2	BRD3-004	574	74aa	ENSP00000360908.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J571 A9J575	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473349.1	BRD3-003	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494743.1	BRD3-006	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 574 bps, Translation length: 74 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000371842.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318420 (version 1)

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Transcript: ENST00000371842.2 BRD3-004

Summary