Transcript: ENST00000504813.1 CNBP-003

Description

CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164]

Gene Synonyms

CNBP1, DM2, PROMM, RNF163, ZCCHC22, ZNF9

Location

Chromosome 3: 128,888,412-128,902,765 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 32 domains and features, is associated with 8154 variant alleles and maps to 399 oligo probes.

Gene

This transcript is a product of gene ENSG00000169714.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000441626.2	CNBP-009	1040	179aa	ENSP00000410769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46906	P62633 Q6T598	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422453.2	CNBP-001	1664	177aa	ENSP00000410619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3056	P62633 Q6T598	NM_003418.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451728.2	CNBP-010	1641	178aa	ENSP00000399488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46907	P62633 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502976.1	CNBP-002	1626	170aa	ENSP00000421323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54637	P62633 Q6T598	NM_001127196.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446936.2	CNBP-011	1623	172aa	ENSP00000400444.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46908	P62633 Q4JGY1 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504813.1	CNBP-003	1549	167aa	ENSP00000422110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P62633 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000500450.2	CNBP-004	1516	160aa	ENSP00000426223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DP17 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512338.1	CNBP-008	502	113aa	ENSP00000424787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502372.1	CNBP-006	1026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507573.1	CNBP-005	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,549 bps, Translation length: 167 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62633

Version

ENST00000504813.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358421 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000504813.1 CNBP-003

Summary