Transcript: ENST00000472820.1 AGPAT2-004

Description

1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:325]

Gene Synonyms

1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta

Location

Chromosome 9: 139,568,161-139,571,832 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2196 variant alleles and maps to 456 oligo probes.

Gene

This transcript is a product of gene ENSG00000169692.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371696.2	AGPAT2-001	1512	278aa	ENSP00000360761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7003	O15120 Q8WUW2	NM_006412.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371694.3	AGPAT2-002	1391	246aa	ENSP00000360759.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35181	O15120	NM_001012727.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538402.1	AGPAT2-201	1357	278aa	ENSP00000438919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7003	O15120 Q8WUW2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472820.1	AGPAT2-004	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470861.1	AGPAT2-003	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 808 bps,

Version

ENST00000472820.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319124 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000472820.1 AGPAT2-004

Summary