Transcript: ENST00000484177.1 NFU1-012

Description

NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16287]

Gene Synonyms

CGI-33, HIRIP, HIRIP5, MMDS1, NIFUC, Nfu, NifU

Location

Chromosome 2: 69,627,505-69,664,557 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 17421 variant alleles and maps to 272 oligo probes.

Gene

This transcript is a product of gene ENSG00000169599.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000410022.2	NFU1-001	1467	254aa	ENSP00000387219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33217	C9J8Q1 F8W9P7 Q9UMS0	NM_001002755.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394305.1	NFU1-201	1044	113aa	ENSP00000377842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42694	C9J8Q1 F8W9P7 Q9UMS0	NM_001002756.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303698.3	NFU1-003	1034	230aa	ENSP00000306965.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46315	C9J8Q1 F8W9P7 Q9UMS0	NM_015700.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484177.1	NFU1-012	668	96aa	ENSP00000417693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8Q1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450796.2	NFU1-011	580	99aa	ENSP00000415102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8Q1 F8W9P7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462320.1	NFU1-008	558	113aa	ENSP00000418598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42694	C9J8Q1 F8W9P7 Q9UMS0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474230.1	NFU1-010	666	126aa	ENSP00000418882.1	Nonsense mediated decay		C9J8Q1 F8W9P7 H7C537	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419370.1	NFU1-006	664	42aa	ENSP00000405495.1	Nonsense mediated decay		F8WAV1	-	-
ENST00000438184.2	NFU1-007	659	39aa	ENSP00000393338.2	Nonsense mediated decay		F8WET4	-	-
ENST00000471185.1	NFU1-009	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 668 bps, Translation length: 96 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000484177.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000354022 (version 1)

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Transcript: ENST00000484177.1 NFU1-012

Summary