Transcript: ENST00000535334.1 ARL13B-201

Description

ADP-ribosylation factor-like 13B [Source:HGNC Symbol;Acc:25419]

Gene Synonyms

ARL2L1, DKFZp761H079, JBTS8

Location

Chromosome 3: 93,698,983-93,774,512 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 34488 variant alleles and maps to 556 oligo probes.

Gene

This transcript is a product of gene ENSG00000169379.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394222.3	ARL13B-005	2453	428aa	ENSP00000377769.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2925	B4DRI8 Q3SXY8	NM_001174150.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535334.1	ARL13B-201	3906	325aa	ENSP00000445145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54615	B4DRI8 Q3SXY8	NM_001174151.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303097.7	ARL13B-001	3264	321aa	ENSP00000306225.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2924	B4DRI8 Q3SXY8	NM_144996.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471138.1	ARL13B-004	2206	428aa	ENSP00000420780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2925	B4DRI8 Q3SXY8	NM_182896.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539730.1	ARL13B-202	1615	149aa	ENSP00000437977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DRI8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478400.1	ARL13B-006	574	59aa	ENSP00000417702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J887	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000335438.3	ARL13B-002	3659	89aa	ENSP00000335400.3	Nonsense mediated decay		C9J887 F8W837	-	-
ENST00000460371.1	ARL13B-009	3203	56aa	ENSP00000417263.1	Nonsense mediated decay		F8WAY0	-	-
ENST00000475206.1	ARL13B-003	665	94aa	ENSP00000418128.1	Nonsense mediated decay		F8WBR2	-	-
ENST00000486562.1	ARL13B-007	681	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492165.1	ARL13B-008	446	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,906 bps, Translation length: 325 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3SXY8

CCDS

This transcript is a member of the Human CCDS set: CCDS54615

Version

ENST00000535334.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000535334.1 ARL13B-201

Summary