Transcript: ENST00000401070.1 RSPO1-004

Description

R-spondin 1 [Source:HGNC Symbol;Acc:21679]

Gene Synonyms

CRISTIN3, FLJ40906, RSPO, RSPONDIN

Location

Chromosome 1: 38,076,951-38,100,337 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 10079 variant alleles and maps to 429 oligo probes.

Gene

This transcript is a product of gene ENSG00000169218.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356545.2	RSPO1-201	2985	263aa	ENSP00000348944.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41304	Q2MKA7	NM_001038633.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401069.1	RSPO1-003	2692	263aa	ENSP00000383847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41304	Q2MKA7	NM_001242908.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401070.1	RSPO1-004	2534	200aa	ENSP00000383848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55590	Q2MKA7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401071.2	RSPO1-202	2462	200aa	ENSP00000383849.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55590	Q2MKA7	NM_001242910.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373059.1	RSPO1-001	2402	236aa	ENSP00000362150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55591	Q2MKA7	NM_001242909.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401068.1	RSPO1-002	2320	263aa	ENSP00000383846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41304	Q2MKA7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 2,534 bps, Translation length: 200 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2MKA7

CCDS

This transcript is a member of the Human CCDS set: CCDS55590

Version

ENST00000401070.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280560 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000401070.1 RSPO1-004

Summary