Transcript: ENST00000472407.1 CCDC126-008

Description

coiled-coil domain containing 126 [Source:HGNC Symbol;Acc:22398]

Gene Synonyms

FLJ23031

Location

Chromosome 7: 23,637,457-23,682,555 forward strand.

About this transcript

This transcript has 4 exons, is associated with 22264 variant alleles and maps to 333 oligo probes.

Gene

This transcript is a product of gene ENSG00000169193.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307471.3	CCDC126-001	2473	140aa	ENSP00000304355.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5384	C9J0J0 Q96EE4	NM_138771.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409765.1	CCDC126-003	2324	140aa	ENSP00000386675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5384	C9J0J0 Q96EE4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410069.1	CCDC126-002	890	140aa	ENSP00000386355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5384	C9J0J0 Q96EE4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448353.1	CCDC126-004	847	110aa	ENSP00000406558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0J0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486109.1	CCDC126-009	800	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484553.1	CCDC126-005	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472407.1	CCDC126-008	797	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485233.1	CCDC126-007	667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 797 bps,

Version

ENST00000472407.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327396 (version 1)

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Transcript: ENST00000472407.1 CCDC126-008

Summary