Transcript: ENST00000543998.1 TCTN2-004

Description

tectonic family member 2 [Source:HGNC Symbol;Acc:25774]

Gene Synonyms

C12orf38, FLJ12975, MKS8, TECT2

Location

About this transcript

This transcript has 6 exons, is associated with 5226 variant alleles and maps to 235 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303372.5	TCTN2-001	2910	697aa	ENSP00000304941.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9253	Q96GX1	NM_024809.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426174.2	TCTN2-002	2513	696aa	ENSP00000395171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45007	Q96GX1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541523.1	TCTN2-003	556	60aa	ENSP00000437644.1	Nonsense mediated decay		F5H6G0	-	-
ENST00000543998.1	TCTN2-004	2918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,918 bps,

Version

ENST00000543998.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400763 (version 1)