Transcript: ENST00000354258.4 TAP1-001

Description

transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:HGNC Symbol;Acc:43]

Gene Synonyms

ABC17, ABCB2, APT1, D6S114E, PSF-1, PSF1, RING4, TAP1*0102N, TAP1N, Y3

Location

About this transcript

This transcript has 11 exons, is annotated with 40 domains and features, is associated with 3993 variant alleles and maps to 1975 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354258.4	TAP1-001	2959	808aa	ENSP00000346206.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4758	F5H648 Q03518 Q53WZ1 Q69DM1 Q9UEE1	NM_000593.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425148.2	TAP1-201	2182	547aa	ENSP00000401919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H648 Q53WZ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486332.1	TAP1-002	2542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487296.1	TAP1-003	1031	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,959 bps, Translation length: 808 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q03518

CCDS

This transcript is a member of the Human CCDS set: CCDS4758

Version

ENST00000354258.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000076087 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.