Transcript: ENST00000354171.8 GPX4-002

Description

glutathione peroxidase 4 [Source:HGNC Symbol;Acc:4556]

Gene Synonyms

GPx-4, GSHPx-4, MCSP, PHGPx, snGPx, snPHGPx

Location

Chromosome 19: 1,103,936-1,106,778 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 2325 variant alleles and maps to 386 oligo probes.

Gene

This transcript is a product of gene ENSG00000167468.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354171.8	GPX4-002	908	197aa	ENSP00000346103.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42457	P36969 Q6PJX4	NM_002085.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589115.1	GPX4-011	820	180aa	ENSP00000466872.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588919.1	GPX4-003	803	260aa	ENSP00000464989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585362.2	GPX4-004	754	145aa	ENSP00000473614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593032.1	GPX4-006	582	194aa	ENSP00000465828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000587648.1	GPX4-009	577	155aa	ENSP00000468349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585480.1	GPX4-010	501	166aa	ENSP00000467900.1	Non stop decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592940.1	GPX4-005	1159	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587932.1	GPX4-012	264	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 908 bps, Translation length: 197 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P36969

CCDS

This transcript is a member of the Human CCDS set: CCDS42457

Version

ENST00000354171.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000458052 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000354171.8 GPX4-002

Summary