Transcript: ENST00000300231.5 MAP1A-001

Description

microtubule-associated protein 1A [Source:HGNC Symbol;Acc:6835]

Gene Synonyms

MAP1L, MTAP1A

Location

About this transcript

This transcript has 6 exons, is annotated with 40 domains and features, is associated with 7382 variant alleles and maps to 559 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300231.5	MAP1A-001	10258	2803aa	ENSP00000300231.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42031	P78559	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382031.1	MAP1A-002	10553	3041aa	ENSP00000371462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PGC8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399453.1	MAP1A-201	10281	2805aa	ENSP00000382380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPX8	NM_002373.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 10,258 bps, Translation length: 2,803 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78559

CCDS

This transcript is a member of the Human CCDS set: CCDS42031

Version

ENST00000300231.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000132894 (version 5)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.