Transcript: ENST00000577766.1 CCDC178-010

Description

coiled-coil domain containing 178 [Source:HGNC Symbol;Acc:29588]

Gene Synonyms

C18orf34, FLJ44050

Location

Chromosome 18: 30,950,051-31,021,065 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 30572 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000166960.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383096.3	CCDC178-002	3391	867aa	ENSP00000372576.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42424	J3QKU2 Q5BJE1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403303.1	CCDC178-202	3354	867aa	ENSP00000385591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42424	J3QKU2 Q5BJE1	NM_001105528.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583930.1	CCDC178-006	3094	891aa	ENSP00000463254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7A7 J3QKU2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000300227.8	CCDC178-001	3087	829aa	ENSP00000300227.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11906	J3QKU2 Q5BJE1	NM_198995.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406524.2	CCDC178-203	3039	891aa	ENSP00000385867.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7A7 J3QKU2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579947.1	CCDC178-003	2925	849aa	ENSP00000462370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKU2 Q5BJE1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402325.1	CCDC178-201	2454	817aa	ENSP00000385234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSU3 J3QKU2 Q5BJE1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581524.1	CCDC178-009	1700	364aa	ENSP00000462651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSU3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000579916.1	CCDC178-008	1017	187aa	ENSP00000462153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRT5 J3QKU2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581852.1	CCDC178-007	876	72aa	ENSP00000464295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRM8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577766.1	CCDC178-010	604	103aa	ENSP00000463236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKU2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000399177.3	CCDC178-005	1017	291aa	ENSP00000382130.3	Non stop decay		J3QKU2 Q6P5S0	-	-
ENST00000583550.1	CCDC178-011	335	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577268.1	CCDC178-012	716	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 604 bps, Translation length: 103 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000577766.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448437 (version 1)

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Transcript: ENST00000577766.1 CCDC178-010

Summary