Transcript: ENST00000554839.1 NAB2-006

Description

NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:HGNC Symbol;Acc:7627]

Gene Synonyms

MADER

Location

Chromosome 12: 57,485,932-57,486,929 forward strand.

About this transcript

This transcript has 3 exons, is associated with 535 variant alleles and maps to 175 oligo probes.

Gene

This transcript is a product of gene ENSG00000166886.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300131.3	NAB2-001	2711	525aa	ENSP00000300131.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8930	Q15742	NM_005967.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357680.4	NAB2-201	2363	322aa	ENSP00000350309.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q15742	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342556.6	NAB2-002	2318	461aa	ENSP00000341491.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q15742	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554718.1	NAB2-007	791	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555857.1	NAB2-005	591	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554839.1	NAB2-006	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 569 bps,

Version

ENST00000554839.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412228 (version 1)

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Transcript: ENST00000554839.1 NAB2-006

Summary