Transcript: ENST00000300026.3 PPIB-001

Description

peptidylprolyl isomerase B (cyclophilin B) [Source:HGNC Symbol;Acc:9255]

Gene Synonyms

CYP-S1, CYPB, OI9, SCYLP

Location

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 3685 variant alleles and maps to 403 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300026.3	PPIB-001	1081	216aa	ENSP00000300026.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10191	P23284	NM_000942.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558492.1	PPIB-003	381	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561048.1	PPIB-002	1208	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,081 bps, Translation length: 216 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23284

CCDS

This transcript is a member of the Human CCDS set: CCDS10191

Version

ENST00000300026.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256604 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.