Transcript: ENST00000580678.1 CYB5A-004

Description

cytochrome b5 type A (microsomal) [Source:HGNC Symbol;Acc:2570]

Gene Synonyms

CYB5, MCB5

Location

Chromosome 18: 71,920,530-71,928,916 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3354 variant alleles and maps to 406 oligo probes.

Gene

This transcript is a product of gene ENSG00000166347.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340533.4	CYB5A-001	834	134aa	ENSP00000341625.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12004	J3KNC7 P00167 Q9UML1	NM_148923.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494131.2	CYB5A-002	776	98aa	ENSP00000436461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12005	P00167	NM_001914.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299438.9	CYB5A-006	718	60aa	ENSP00000299438.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KNC7 Q9UML1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397914.4	CYB5A-005	619	124aa	ENSP00000381011.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54188	P00167	NM_001190807.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579064.1	CYB5A-007	305	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000583418.1	CYB5A-003	5913	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580678.1	CYB5A-004	1173	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,173 bps,

Version

ENST00000580678.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444240 (version 1)

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Transcript: ENST00000580678.1 CYB5A-004

Summary