Transcript: ENST00000548372.1 ASPG-003

Description

asparaginase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20123]

Gene Synonyms

C14orf76, GPA/WT

Location

Chromosome 14: 104,552,023-104,573,572 forward strand.

About this transcript

This transcript has 11 exons, is associated with 11253 variant alleles and maps to 371 oligo probes.

Gene

This transcript is a product of gene ENSG00000166183.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000551177.1	ASPG-001	2031	573aa	ENSP00000450040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45170	Q86U10	NM_001080464.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455920.2	ASPG-201	1844	579aa	ENSP00000389003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YHD3 Q86U10	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546892.2	ASPG-005	1791	555aa	ENSP00000448911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1Y8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550583.1	ASPG-002	467	140aa	ENSP00000446856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YHD3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551170.1	ASPG-008	377	126aa	ENSP00000447032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000549809.1	ASPG-006	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552126.1	ASPG-007	244	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556267.1	ASPG-009	171	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548372.1	ASPG-003	2157	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000551871.1	ASPG-004	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 0, Transcript length: 2,157 bps,

Version

ENST00000548372.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407006 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000548372.1 ASPG-003

Summary