Transcript: ENST00000420892.1 HTRA1-002

Description

HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:9476]

Gene Synonyms

ARMD7, CARASIL, HTRA, HtrA, IGFBP5-protease, L56, ORF480, PRSS11

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 3952 variant alleles and maps to 413 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368984.3	HTRA1-001	2120	480aa	ENSP00000357980.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7630	A8K224 H0Y7G9 Q92743	NM_002775.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420892.1	HTRA1-002	1214	221aa	ENSP00000412676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8K224 H0Y7G9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,214 bps, Translation length: 221 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000420892.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050802 (version 2)