Transcript: ENST00000524487.1 RAPSN-004

Description

receptor-associated protein of the synapse [Source:HGNC Symbol;Acc:9863]

Gene Synonyms

CMS1D, CMS1E, RAPSYN, RNF205

Location

Chromosome 11: 47,459,316-47,470,605 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 5736 variant alleles and maps to 306 oligo probes.

Gene

This transcript is a product of gene ENSG00000165917.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298854.2	RAPSN-001	1671	412aa	ENSP00000298854.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7936	Q13702	NM_005055.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352508.3	RAPSN-002	1452	353aa	ENSP00000298853.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7937	Q13702	NM_032645.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529341.1	RAPSN-003	1408	353aa	ENSP00000431732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524487.1	RAPSN-004	1386	424aa	ENSP00000435551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJP9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528356.1	RAPSN-005	405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,386 bps, Translation length: 424 residues

Version

ENST00000524487.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391729 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000524487.1 RAPSN-004

Summary