Transcript: ENST00000467261.1 PPP1R36-002

Description

protein phosphatase 1, regulatory subunit 36 [Source:HGNC Symbol;Acc:20097]

Gene Synonyms

C14orf50

Location

About this transcript

This transcript has 13 exons, is associated with 15943 variant alleles and maps to 387 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298705.1	PPP1R36-001	1405	422aa	ENSP00000298705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9767	E9PLB5 G3V5S6 Q96LQ0	NM_172365.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557202.1	PPP1R36-003	596	44aa	ENSP00000452491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5S6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467261.1	PPP1R36-002	1400	45aa	ENSP00000435229.1	Nonsense mediated decay		E9PLB5	-	-
ENST00000555645.1	PPP1R36-004	576	74aa	ENSP00000451900.1	Nonsense mediated decay		E9PLB5 G3V4N3	-	-
ENST00000554400.1	PPP1R36-006	1686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556023.1	PPP1R36-005	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 3, Transcript length: 1,400 bps, Translation length: 45 residues

Version

ENST00000467261.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280668 (version 2)

Annotation Attributes

dotter confirmed [Definitions]