Transcript: ENST00000602712.2 MARCH8-005

Description

membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:23356]

Gene Synonyms

MARCH-VIII, MIR, RNF178, c-MIR

Location

Chromosome 10: 45,956,531-46,090,025 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 54791 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000165406.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395771.3	MARCH8-202	2589	291aa	ENSP00000379118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7213	Q5T0T0	NM_001002265.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453424.2	MARCH8-002	5636	573aa	ENSP00000411848.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60519	H0Y7C6	NM_001282866.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319836.3	MARCH8-201	2496	291aa	ENSP00000317087.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7213	Q5T0T0	NM_145021.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395769.2	MARCH8-001	1848	291aa	ENSP00000379116.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7213	Q5T0T0	NM_001002266.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453980.3	MARCH8-004	695	89aa	ENSP00000396678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476962.1	MARCH8-003	2155	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000451376.1	MARCH8-006	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602712.2	MARCH8-005	992	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 992 bps,

Version

ENST00000602712.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000470683 (version 1)

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Transcript: ENST00000602712.2 MARCH8-005

Summary