Transcript: ENST00000297784.5 TMC1-001

Description

transmembrane channel-like 1 [Source:HGNC Symbol;Acc:16513]

Gene Synonyms

DFNA36, DFNB11, DFNB7

Location

Chromosome 9: 75,136,717-75,451,267 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 18 domains and features, is associated with 127178 variant alleles and maps to 616 oligo probes.

Gene

This transcript is a product of gene ENSG00000165091.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297784.5	TMC1-001	3201	760aa	ENSP00000297784.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6643	Q8TDI8	NM_138691.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340019.3	TMC1-201	3090	760aa	ENSP00000341433.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6643	Q8TDI8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396237.3	TMC1-202	2371	760aa	ENSP00000379538.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6643	Q8TDI8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486417.1	TMC1-002	1528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497073.1	TMC1-003	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469455.1	TMC1-005	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492418.1	TMC1-004	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 20, Transcript length: 3,201 bps, Translation length: 760 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TDI8

CCDS

This transcript is a member of the Human CCDS set: CCDS6643

Version

ENST00000297784.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052655 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000297784.5 TMC1-001

Summary