Transcript: ENST00000297620.4 FAM219A-008

Description

family with sequence similarity 219, member A [Source:HGNC Symbol;Acc:19920]

Gene Synonyms

C9orf25, FLJ39031, bA573M23.5

Location

Chromosome 9: 34,398,188-34,458,568 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 23918 variant alleles and maps to 437 oligo probes.

Gene

This transcript is a product of gene ENSG00000164970.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445726.1	FAM219A-201	3644	185aa	ENSP00000392452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55304	Q5T593 Q8IW50	NM_001184941.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379089.1	FAM219A-001	3624	183aa	ENSP00000368382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379080.1	FAM219A-007	3591	172aa	ENSP00000368371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	NM_001184942.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297620.4	FAM219A-008	3588	168aa	ENSP00000297620.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6556	Q8IW50	NM_147202.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379087.1	FAM219A-002	3573	166aa	ENSP00000368380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379081.1	FAM219A-004	3543	156aa	ENSP00000368372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	NM_001184945.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379084.1	FAM219A-003	893	164aa	ENSP00000368377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T586	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422409.1	FAM219A-005	798	168aa	ENSP00000409737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T593	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379078.1	FAM219A-006	770	156aa	ENSP00000368369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,588 bps, Translation length: 168 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IW50

CCDS

This transcript is a member of the Human CCDS set: CCDS6556

Version

ENST00000297620.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251703 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000297620.4 FAM219A-008

Summary